Short answer

They were judged for treason in war, not killed for being Jews. Banu Qurayza, a Jewish tribe of Medina, were in treaty with the Prophet Muhammad (ﷺ), and broke it while an army was besieging the city (Bukhari 4028). After the siege they surrendered and agreed to the judgement of Sa'd ibn Mu'adh, chief of the Aws, their own allies (Bukhari 4121). He judged that their fighting men be put to death and the women and children taken captive. That is the Torah's own law for a city that refuses peace and makes war (Deuteronomy 20:12-14). Sa'd's ruling was narrower: boys who had not reached puberty were let go (Tirmidhi 1584). Those who came over to the Prophet (ﷺ) were granted safety (Bukhari 4028). Treason is still punishable by death in the United States today (18 U.S. Code 2381), and in many countries around the world. India can punish waging war against the state with death, and Japan's law sets death for plotting with a foreign power that then attacks the country. Even Brazil, which ended the death penalty in peacetime, keeps it for treason in a declared war.

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